DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hoxc6b

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_073772180.1 Gene:hoxc6b / 58045 ZFINID:ZDB-GENE-000822-1 Length:228 Species:Danio rerio


Alignment Length:82 Identity:30/82 - (36%)
Similarity:50/82 - (60%) Gaps:1/82 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQT 358
            |....:|:.|..::.:|...|||.|...:||:.:.|.|:|:.|.||:.|:|.|:||||.|||:::
Zfish   131 GYGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMKWKKES 195

  Fly   359 AVGLELLAEAGNFAAFQ 375
            .: ..:|.:.|:..|.|
Zfish   196 NL-TSILNDNGSVGAGQ 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 24/55 (44%)
hoxc6bXP_073772180.1 None

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