Protein Alignment B-H1 and hoxc9a

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_571603.3
• Gene: hoxc9a / 58043
• ZFINID: ZDB-GENE-000328-5
• Length: 270
• Species: Danio rerio
• Alignment Length: 324
• Identity: 71/324 - (21%)
• Similarity: 104/324 - (32%)
• Gaps: 133/324 - (41%)

  Fly   101 LHHHNNNNNSGSSGGS-SPAHSNNNNNINGDNCEASNVAGVG----------VLPSALHHPQ--- 151
            :|.....|.:.|:.|. |..:.::..|...::..||.....|          ::|....:|.
Zfish     1 MHVKEKGNIAMSATGPISNYYVDSLINHESEDVLASRFTATGPISSSSRPTPLVPECADYPSCSF 65

  Fly   152 -PHPPT----------------HPHTH-PH---------ALMHPHGKLGHFPPTAGGNGLNVAQY 189
             |.||.                ||:|| ||         :.:.|......||..||.:
Zfish    66 APKPPVFTTSWAPVHSQSSVVYHPYTHQPHLGTDSRYVRSWLEPIPGTVSFPGYAGNS------- 123

  Fly   190 AAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAP-----PAGGDLD 249
                 :||                                         ||.|     |..||..
Zfish   124 -----RHY-----------------------------------------GLKPDTFQDPRAGDCL 142

  Fly   250 DSS-------------DYHEENEDCDSGNMDDHSVCSNGGKDDD---------GNSVKSGSTSDM 292
            .|:             |..|:.::..|  .:..|:.|...|||.         .|.:.:.||
Zfish   143 GSNGRTYTDYLYCSAVDIREKQQNTPS--PETESLSSGKHKDDKAELDPNNPVANWIHARST--- 202

  Fly   293 SGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
                   ||.|..:|.:|...|||.|....||:...|.|:|..|:|::.|||.|:||||.|.|:
Zfish   203 -------RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	25/55 (45%)
hoxc9a	NP_571603.3	Hox9_act	11..189	CDD:461369	40/232 (17%)
		Homeodomain	203..251	CDD:459649	20/47 (43%)