Protein Alignment B-H1 and hoxc11b

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: XP_009298848.2
• Gene: hoxc11b / 570925
• ZFINID: ZDB-GENE-000822-3
• Length: 306
• Species: Danio rerio
• Alignment Length: 320
• Identity: 74/320 - (23%)
• Similarity: 118/320 - (36%)
• Gaps: 66/320 - (20%)

  Fly    56 TMSSGGSTTTASGIGKPNRSRFMINDILAGSAAAAFYKQQQHHQQLHHHNNNNNSGSSGGSSPAH 120
            |...|...:.||.:..|  |.:.:.:.   |..::|..|.|..|..:.::.|..........|..
Zfish    19 TSEFGERASCASNLYLP--STYYVPEF---STVSSFLPQAQSRQITYSYSTNFTQVPQVRDLPFE 78

  Fly   121 SNN----NNNINGDNCEASNVAGVGVLPSALHHPQPHPPT---------------HPHTHPHALM 166
            .|.    ::..|..:|.|.         ..|.|....||:               |.|.|| |:.
Zfish    79 LNPSGKWHHRGNYSSCYAE---------EDLVHRDCLPPSATMTEMLMKNENVYNHHHYHP-AIN 133

  Fly   167 HPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVD 231
            ||            |.|.            |::.........:.......|.:.|..|.....:.
Zfish   134 HP------------GTGF------------YSSIGKTNVLPQSFDRFLDCAHSGADGGSEGNCLQ 174

  Fly   232 GGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLS 296
            .|..|....|......|..::|..:|.| |:..........|:|.|:|  |..|||.::     :
Zfish   175 KGSSGKPESASQVSSVLRSTADGEKELE-CEKNTTSGSFETSSGTKND--NQTKSGHST-----T 231

  Fly   297 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            .:.||.|..:|..|::.||:.|....|::.::|.:|:..|:|:|.|||.|:||||.|.|:
Zfish   232 PRMRKKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRILNLTDRQVKIWFQNRRMKEKK 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	23/55 (42%)
hoxc11b	XP_009298848.2	None