DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and gsx2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001020683.1 Gene:gsx2 / 561076 ZFINID:ZDB-GENE-041001-114 Length:242 Species:Danio rerio


Alignment Length:248 Identity:66/248 - (26%)
Similarity:87/248 - (35%) Gaps:87/248 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 VLPSALHHPQPHPPTHP-----------------HTHPHALMHPHGKLGHFPPTAGGNGLNVAQY 189
            ::|..:|.|.....|.|                 .:|.|:   |.|.:    |...|.|      
Zfish    29 LIPIGMHSPGVMSVTAPICPSRKTGTFCVCPLCVSSHIHS---PRGGI----PLLKGQG------ 80

  Fly   190 AAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAP---PAGGDLDDS 251
                   :.|..||...|         .|...:..:|.|        |.|.||   |....:.|.
Zfish    81 -------FTAGDAAFCQR---------MAHQQSPALAHP--------GHGHAPVCTPTSFSVTDP 121

  Fly   252 SDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEK 316
            ..||     |.|....|:|...||                        ::.|||||..||..||:
Zfish   122 RRYH-----CLSLGASDNSHIQNG------------------------KRMRTAFTSTQLLELER 157

  Fly   317 SFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAG 369
            .|....|||...|.|:|..|:||:.|||.|:||||.|.|:: ..|.:..|.||
Zfish   158 EFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE-GKGTQRSAHAG 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
gsx2NP_001020683.1 Homeodomain 141..197 CDD:459649 28/55 (51%)

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