DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and nkx6.3

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001159612.1 Gene:nkx6.3 / 558978 ZFINID:ZDB-GENE-070810-7 Length:272 Species:Danio rerio


Alignment Length:153 Identity:50/153 - (32%)
Similarity:77/153 - (50%) Gaps:22/153 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 AGVAAPPVDGGVD--GGVGLAPPAGG-----DLDDS--SDYHEENEDCDSGNMDDHSVC------ 272
            :|...|.:..|..  ||.|...|:.|     |...|  |.:.:...:| :|.....|.|      
Zfish    65 SGPGTPALLSGYPSMGGFGTTVPSPGVYYNRDYTPSGLSTFPKPVVEC-AGMKGKSSSCWVDGGY 128

  Fly   273 -SNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKL 336
             ..|.:...||::  |...:..|   |::..|..|:.||:..|||:||:.|||:..||..||:.|
Zfish   129 EWRGARQQCGNNM--GHNPENVG---KKKHTRPTFSGHQIFALEKTFEQTKYLAGPERARLAYSL 188

  Fly   337 DLSDCQVKTWYQNRRTKWKRQTA 359
            .:::.|||.|:|||||||::::|
Zfish   189 GMTESQVKVWFQNRRTKWRKKSA 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
nkx6.3NP_001159612.1 Homeodomain 150..208 CDD:459649 29/57 (51%)

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