Protein Alignment B-H1 and nkx3.3

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001013342.2
• Gene: nkx3.3 / 503746
• ZFINID: ZDB-GENE-050306-27
• Length: 240
• Species: Danio rerio
• Alignment Length: 107
• Identity: 42/107 - (39%)
• Similarity: 60/107 - (56%)
• Gaps: 4/107 - (3%)

  Fly   251 SSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLE 315
            |||.|...|:...   :|:|:......:.|....:|.|..|.:..|.|:| :|.||:..|:..||
Zfish    67 SSDQHSCEEESTG---EDNSLERRHDHEMDQQKPQSCSFEDSNPKSSKKR-SRAAFSHAQVYELE 127

  Fly   316 KSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQ 357
            :.|..|:|||..||.:||..|.|::.|||.|:||||.|.||:
Zfish   128 RRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRR 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	27/55 (49%)
nkx3.3	NP_001013342.2	Homeodomain	112..168	CDD:459649	27/56 (48%)