DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Bsx

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001178924.1 Gene:Bsx / 500982 RGDID:1565120 Length:232 Species:Rattus norvegicus


Alignment Length:68 Identity:39/68 - (57%)
Similarity:49/68 - (72%) Gaps:0/68 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 SDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKW 354
            :::.|...::|||||.|:|.||..|||.||.|:|||..||.|||..|.||:.|||||:||||.|.
  Rat   101 AELPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKH 165

  Fly   355 KRQ 357
            |:|
  Rat   166 KKQ 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 36/55 (65%)
BsxNP_001178924.1 Homeodomain 111..167 CDD:459649 36/55 (65%)

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