DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Emx1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001414509.1 Gene:Emx1 / 500235 RGDID:1564002 Length:290 Species:Rattus norvegicus


Alignment Length:298 Identity:81/298 - (27%)
Similarity:120/298 - (40%) Gaps:63/298 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 CEASNVAGVGVLPSALHHPQPHPPTHPHTHPHA--LMHPHGKLGHF-------------PPTAGG 181
            |:|.........|.  |...|..|. ||:...|  :..|..|.|..             .|.:||
  Rat     2 CQAWCTPRTAAAPG--HRAFPRAPL-PHSSSAAATMFQPATKRGFTIESLVAKDGGTGGSPGSGG 63

  Fly   182 NGLNVAQYAAAMQQ------HYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGL 240
            .|.:....||:.:.      :|...:||..|..:...|||||.|:.:           :.||..|
  Rat    64 AGSHPLAVAASEEPLRPTALNYPHPSAAETAFVSGFPAAAAAGASRS-----------LYGGPEL 117

  Fly   241 APPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDD------------DGNSVKSGSTSDMS 293
            ..|...: ..:...|..::...|.....||..|...:|.            .|:..:: |.....
  Rat   118 VFPEAMN-HPALTVHPAHQLGSSSLQPPHSFFSAQHRDPLHFYPWVLRNRFFGHRFQA-SEVPQD 180

  Fly   294 GL------SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRT 352
            ||      ::|.::.||||:..||..||::||:..|:...||::||..|.||:.|||.|:|||||
  Rat   181 GLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRT 245

  Fly   353 KWKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYA 390
            |:|||.      |.|.|  ...::...||.::..|..|
  Rat   246 KYKRQK------LEEEG--PESEQKKKGSHHINRWRIA 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
Emx1NP_001414509.1 None

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