DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Tlx1

DIOPT Version :9

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001102636.1 Gene:Tlx1 / 499361 RGDID:1563655 Length:333 Species:Rattus norvegicus


Alignment Length:358 Identity:90/358 - (25%)
Similarity:113/358 - (31%) Gaps:112/358 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 HHLHYGLQPPAVAHSIHSTTTMSSGGSTTTAS-------GIGKPNRSRFMINDILAGSAAAAFYK 93
            ||||.|...|..........:...||....||       |:|           .|.|.|..    
  Rat     7 HHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLG-----------CLVGGAYT---- 56

  Fly    94 QQQHHQQLHHHNNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHP 158
                              ..||.|.|         |.....:...|.|                 
  Rat    57 ------------------YGGGGSAA---------GAGAGGTGAYGTG----------------- 77

  Fly   159 HTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAA 223
                    .|.|..|  |...||...::...|.:...:.|.|...........|.|..|.|.:||
  Rat    78 --------GPGGPGG--PAGGGGGACSMGPLAGSYNVNMALAGGPGPGGGGGGAGAGGAGALSAA 132

  Fly   224 GVAAPPVDGGVDGGV--------GL-------APPAGGDLDD-SSDYHEENEDCDSGNMDDHSVC 272
            ||...|....:.|.|        ||       |.|...:|.. :..:.|.|..........|.. 
  Rat   133 GVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAVPGVNNLTGLTFPWMESNRRYTKDRFTGHPY- 196

  Fly   273 SNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLD 337
                               .:....|::|.||:||..|:..|||.|.|||||:..||..||..|.
  Rat   197 -------------------QNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALK 242

  Fly   338 LSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGN 370
            ::|.|||||:|||||||:||||...|...:..|
  Rat   243 MTDAQVKTWFQNRRTKWRRQTAEEREAERQQAN 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeobox 303..355 CDD:278475 31/51 (61%)
Tlx1NP_001102636.1 Homeobox 207..260 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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