DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Hoxb7

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001017480.1 Gene:Hoxb7 / 497985 RGDID:1559918 Length:219 Species:Rattus norvegicus


Alignment Length:196 Identity:58/196 - (29%)
Similarity:85/196 - (43%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 YAAAMQQHYAAAAAAAA-----ARNNAAAAAAAAAAAAAAGVAAP---PVDGGVDGGVGLAP--- 242
            ||.|:...|.||::..|     .:.:.|.|:........||..||   .|.|...||.|:|.   
  Rat     6 YANALFSKYPAASSVFAPGAFPEQTSCAFASNPQRPGYGAGPGAPFSASVQGLYSGGGGMAGQSA 70

  Fly   243 ----PAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSK------ 297
                .||..|:.||    .|..|.....:...||.  |........|....||::..|.      
  Rat    71 AGVYEAGYGLEPSS----FNMHCAPFEQNLSGVCP--GDPAKAAGAKEQRDSDLAAESNFRIYPW 129

  Fly   298 ------KQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
                  ::::.|..:|.:|...|||.|...:||:.:.|.|:||.|.|::.|:|.|:||||.|||:
  Rat   130 MRSSGTERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 194

  Fly   357 Q 357
            :
  Rat   195 E 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 24/55 (44%)
Hoxb7NP_001017480.1 Antp-type hexapeptide 126..131 0/4 (0%)
Homeodomain 138..194 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..219 1/3 (33%)

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