DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hoxa5

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001011405.1 Gene:hoxa5 / 496880 XenbaseID:XB-GENE-486061 Length:274 Species:Xenopus tropicalis


Alignment Length:9 Identity:6/9 - (66%)
Similarity:6/9 - (66%) Gaps:0/9 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PRGTPYEGG 49
            |||...|||
 Frog    37 PRGPGPEGG 45

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649
hoxa5NP_001011405.1 Homeodomain 200..256 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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