DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and E5

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:388 Identity:90/388 - (23%)
Similarity:128/388 - (32%) Gaps:124/388 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SIHSTTTMSSGGSTTTASGIGKPNRSRFMINDILAGSA-------AAAFYKQQQHHQQLHHHNNN 107
            |:.:::|..|..||.:||...|| :..|.|:.|:..|:       .:.........:......|.
  Fly    26 SVAASSTSVSASSTVSASASSKP-KLAFSIDSIVGESSTRSAPLRVSVISSPPPRSESPASPTNT 89

  Fly   108 NNSG--------------------SSGGSSPAHSNNNNNINGDNCEASNVA-------GVGVLPS 145
            ||||                    |...|..:.|.:..|..|:...|.|.|       |.| .|.
  Fly    90 NNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAGGNPAAAGNTAKSGDPSSGTG-NPP 153

  Fly   146 ALHHPQPHP----------------------PTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQ 188
            .|..|.|.|                      |.||.:.|             ||.....    .|
  Fly   154 TLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQP-------------PPFLAAQ----FQ 201

  Fly   189 YAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGG-----------VGLAP 242
            .|||:..|:.........:                   .|||..|...|           :|:.|
  Fly   202 MAAALAHHHQQQQQQQQQQ-------------------LPPVPTGPPHGPHPHLPPGQIPLGIFP 247

  Fly   243 PAGGDLDDSSDYHEENEDCDSGNMDDHS------VCSNGGK---DDDGNSVKSGSTSDMSGLSKK 298
              ||........|..:....:.::...|      :.|..|:   ...||.:...        .:|
  Fly   248 --GGPHPGHPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQP--------FRK 302

  Fly   299 QRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVG 361
            .::.||||:..||..||.:||...|:...||::||..|.|::.|||.|:||||||.||....|
  Fly   303 PKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEG 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
E5NP_524825.1 Homeodomain 304..360 CDD:459649 27/55 (49%)

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