Protein Alignment B-H1 and ro

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 485
• Identity: 110/485 - (22%)
• Similarity: 140/485 - (28%)
• Gaps: 233/485 - (48%)

  Fly    10 QTPSEPNAAHPQLHHHLSTLQQQHHQ----HHLHYGLQPPAVAHSIHSTTTMSSGGSTTTASGIG 70
            |.||.|.....:|:.||.|...::.:    .|.|   :||......|     |.|||      :.
  Fly    36 QRPSSPRQFFERLYGHLETRSSENGEIDVGTHAH---KPPPCDTPYH-----SDGGS------VS 86

  Fly    71 KPNRSRFMIND---ILAGSAAAAFY--------KQQQHHQQLHHHNNNNNSGSSGGSSPAHSNNN 124
            .|:.|   |:|   .||...|..||        ...|.|||.|||
  Fly    87 SPDIS---ISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHH-------------------- 128

  Fly   125 NNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQY 189
                                   ||           ||..|:|.  ||.:..|
  Fly   129 -----------------------HH-----------HPPQLVHQ--KLSYVSP------------ 145

  Fly   190 AAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDY 254
                                        ..|.|||.||.||       :..|.|||    ..||.
  Fly   146 ----------------------------PPAIAAGGAANPV-------LPHAFPAG----FPSDP 171

  Fly   255 HEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKK---QRKARTAFTDHQLQTLEK 316
            |                            ..:|.::.::...:|   ||:.||.|:..|...||.
  Fly   172 H----------------------------FSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEV 208

  Fly   317 SFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLYGGS 381
            .|.|.:|:|...|.|||..|.|::.|:|.|:||||.|.||
  Fly   209 EFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKR------------------------- 248

  Fly   382 PYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVGV--GVGVGVGPA 444
                              .....||.:||....|......:.......:|..||  ||.||||
  Fly   249 ------------------IEKAQIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVG-- 293

  Fly   445 PFSHLSASSSLSSLSSYYQSAAAAASAANP 474
                          .:||  ||||..||.|
  Fly   294 --------------LNYY--AAAATPAALP 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	25/55 (45%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	23/51 (45%)