DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and slou

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001262808.1 Gene:slou / 42547 FlyBaseID:FBgn0002941 Length:698 Species:Drosophila melanogaster


Alignment Length:658 Identity:155/658 - (23%)
Similarity:215/658 - (32%) Gaps:269/658 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKDSMSILTQTPSEPNAAHPQLHHHLSTLQQ-----QHHQHHLHYGLQPPAVAHSIHSTTTMSSG 60
            ::.|:..|.|..||..:    |...||.||:     :...|:.:..|    ..|:.:|.|..|..
  Fly    84 LRYSLERLKQMSSESGS----LLSRLSPLQEDSQDKEKPNHNNNNSL----TNHNANSNTRRSQS 140

  Fly    61 GSTTTAS-GIGKPNRSRFMINDILAGSAA---------AAFYKQQQH-----------HQQLHHH 104
            ...:..| ....|.:.|.::........|         ||..:|..|           .|.:|||
  Fly   141 PPASVGSVSFSSPAQQRKLLELNAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHH 205

  Fly   105 NNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMH-- 167
            .:.::      ..|||                       |.:..||.|||..|||.||.|:.|  
  Fly   206 QHQHH------QHPAH-----------------------PHSHQHPHPHPHPHPHPHPSAVFHLR 241

  Fly   168 -----------------------------------------PHGKLGHFPP----TAGGNGLN-- 185
                                                     ||...   ||    .|..:.::  
  Fly   242 APSSSSTAPPSPATSPLSPPTSPAMHSDQQMSPPIAPPQNPPHSSQ---PPQQQQVAAPSDMDLE 303

  Fly   186 ----VAQYAAAMQQHYAAAAAAAAAR--NNAA----------------------------AAAAA 216
                ||..||...|..:.:|.|:|:.  :||:                            |||||
  Fly   304 RIKLVAAVAARTTQASSTSALASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAAA 368

  Fly   217 AAAAAAAGVAAPP-----------VDGG----------------VD-----GGVGLAPPAGGDLD 249
            ||||.:..:||..           |||.                ||     .....|.|:.....
  Fly   369 AAAATSRQIAAATYARSDTSEELNVDGNDEDSNDGSHSTPSVCPVDLTRSVNSSAAANPSSASTS 433

  Fly   250 DSSD--------------------------------------YH-----------EENEDC---D 262
            .|||                                      |.           :::||.   |
  Fly   434 ASSDRDAATKRLAFSVENILDPNKFTGNKLPSGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQD 498

  Fly   263 SGNMDDHSVCSNGGKDDDGNS---VKSGSTSDMSGLS-------KKQRKARTAFTDHQLQTLEKS 317
            ..:||...:|.:|...||.:|   .|.|.:.:..|.|       .|.|:||||||..||.:||..
  Fly   499 LNDMDQDDMCDDGSDIDDPSSETDSKKGGSRNGDGKSGGGGGGGSKPRRARTAFTYEQLVSLENK 563

  Fly   318 FERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAE------AGNFA---- 372
            |:..:||||.||..||..|.|::.|||.|:||||||||:|.. |:::.:.      .|:|.    
  Fly   564 FKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP-GMDVNSPTIPPPGGGSFGPGAY 627

  Fly   373 AFQRLYGGS-PYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVGVG 436
            |...||..: ||....||....||.|.:..|          : ...||:.| ..|:   ...|..
  Fly   628 ASGLLYSHAVPYPPYGPYFHPLGAHHLSHSH----------SXNCKMQQRL-LQLF---EKRGRA 678

  Fly   437 VGVGVGPA 444
            |..|.|||
  Fly   679 VAGGAGPA 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 33/55 (60%)
slouNP_001262808.1 Homeodomain 546..602 CDD:459649 33/55 (60%)

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