DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and CG18599

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster


Alignment Length:468 Identity:119/468 - (25%)
Similarity:167/468 - (35%) Gaps:182/468 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 HPQLHHHLSTLQQQHHQHHLHYGLQPPAVAHSIHS--------TTTMSSGGSTTTASGIGKPNRS 75
            |.|.||.|.. |||..|||.|..|      |:.|.        |.|..:..:.:::|.....:.|
  Fly    77 HQQQHHQLQQ-QQQQQQHHHHQQL------HTHHQDGHHPHPPTPTTGNNNNNSSSSSNSSSHNS 134

  Fly    76 RFMINDILAGSAAAA-----------------------------FYKQQQHHQ-----QLHHH-- 104
            .....:.||.:||.|                             ...|::.:.     .||.:  
  Fly   135 NSNHREQLAAAAATATSHAQLIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNN 199

  Fly   105 --------------NNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPP 155
                          |||||:.::|||:..::|::.::|..||:  :|||.|   ..||....|| 
  Fly   200 IIGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCD--SVAGNG---RYLHGGHQHP- 258

  Fly   156 THPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAA 220
                       |||                        |..:||.|||                 
  Fly   259 -----------HPH------------------------QAGFAAVAAA----------------- 271

  Fly   221 AAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVK 285
                             ||.||.|   |......|::           |..............:|
  Fly   272 -----------------VGAAPSA---LQSLQQLHQQ-----------HHAQQQATLSFQREKLK 305

  Fly   286 SGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNR 350
            |.| ...|.|  |.::.||.||..||:.||..||||:|:...||..|||.|.|::.|||.|:|||
  Fly   306 SDS-HKKSAL--KNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNR 367

  Fly   351 RTKWKRQTAVGLELLAEAGNFAAFQRL-------YGGSPYLGAWPYAAAAGAAHG-ATPHTNIDI 407
            |.||::.   .|||..        |||       ..|:..||. ..:.:|.|||. :|..||   
  Fly   368 RIKWRKH---HLELTQ--------QRLALIRQTQLPGTSLLGN-QVSVSANAAHSVSTERTN--- 417

  Fly   408 YYRQAAAAAAMQK 420
              ..:||:.::|:
  Fly   418 --GCSAASPSLQE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 30/55 (55%)
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 30/55 (55%)

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