DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H1 and ftz

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:449 Identity:91/449 - (20%)
Similarity:151/449 - (33%) Gaps:113/449 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LSTLQQQHHQHHLH----YGLQPPAVAHSIHSTTTMSSGGSTTTASGIGKPNRSRFMINDILAGS 86
            ::|...|.|..:..    |.:..|   ||:..|...:||      |.....|.|.:.        
  Fly     1 MATTNSQSHYSYADNMNMYNMYHP---HSLPPTYYDNSG------SNAYYQNTSNYQ-------- 48

  Fly    87 AAAAFYKQQQHHQQLHHHNNNNNSGSS-----GGSSPAHSNNNNNINGDNCEASNVAGVGVLPSA 146
               .:|.|:.:.:..:::||.....:.     ..::|...........|  .||.:|.|...||.
  Fly    49 ---GYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKATKRKAEDD--AASIIAAVEERPST 108

  Fly   147 LHHPQPHPPTHPHTHPHALMHPHGKLGHFP-------------PTAGGNGLNVAQYAAAMQQHYA 198
            |.              ..|.:|..||.:.|             |.....  ..|..|.:..|.|.
  Fly   109 LR--------------ALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTK--VTASPAPSYDQEYV 157

  Fly   199 AAAAAAA-------------ARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDD 250
            .....:|             ::.........|........:.||::     |:...|.:.|:...
  Fly   158 TVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLE-----GISTPPQSPGEKSS 217

  Fly   251 SSDYHEENEDCDSGNMDDHSVCS--NGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQT 313
            |:...|.|          |.:.:  ||..|.:.:.::....||    .|..::.|..:|.:|...
  Fly   218 SAVSQEIN----------HRIVTAPNGAGDFNWSHIEETLASD----CKDSKRTRQTYTRYQTLE 268

  Fly   314 LEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLY 378
            |||.|...:|::.:.|.::|:.|.||:.|:|.|:||||.|.|:...  |:...|          :
  Fly   269 LEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRT--LDSSPE----------H 321

  Fly   379 GGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVGVGV 437
            .|:.|....|...|...|....|...:.:|:.....||       |..|:...|.|.|:
  Fly   322 CGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAA-------YPAYSHSHSHGYGL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 21/55 (38%)
ftzNP_477498.1 FTZ 1..248 CDD:397787 50/299 (17%)
Homeodomain 255..311 CDD:459649 21/55 (38%)
KLF1_2_4_N <321..404 CDD:425360 14/60 (23%)

Return to query results.
Submit another query.