Protein Alignment B-H1 and Scr

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 536
• Identity: 136/536 - (25%)
• Similarity: 187/536 - (34%)
• Gaps: 195/536 - (36%)

  Fly    11 TPS-EPNAAHPQLHHH-------------------------LSTLQQQHHQHHLHYGLQPPAVAH 49
            ||: .||.  ||.|:.                         |...|||..|.|.|
  Fly    83 TPNLYPNT--PQAHYANQAAYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAH---------- 135

  Fly    50 SIHSTTTMSSGGSTTTASGIGKPNRSRFMINDILAGSAAAAFYK----QQQHHQQLHHHNNNNNS 110
                                              |.:|.||..:    ||||.||.......|.|
  Fly   136 ----------------------------------AAAAVAAQQQQQLAQQQHPQQQQQQQQANIS 166

  Fly   111 -----------GSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHA 164
                       ||.||.....:||||:.|.:|..:.::|.    |..|......|...|.
  Fly   167 CKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLAS----PQDLSTRDISPKLSPS----- 222

  Fly   165 LMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPP 229
                                             :...:.|.:.|......:.||||||||:....
  Fly   223 ---------------------------------SVVESVARSLNKGVLGGSLAAAAAAAGLNNNH 254

  Fly   230 VDGGVDGGVG-----LAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKS--- 286
            ...||.||.|     :..|.|||.|..|         ||||       ..|...:.||..|:
  Fly   255 SGSGVSGGPGNVNVPMHSPGGGDSDSES---------DSGN-------EAGSSQNSGNGKKNPPQ 303

  Fly   287 -----------GSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSD 340
                       .||.:.:|.:|:|   ||::|.:|...|||.|...:||:.:.|.|:||.|.|::
  Fly   304 IYPWMKRVHLGTSTVNANGETKRQ---RTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTE 365

  Fly   341 CQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLYGGSPY------LGAWPYAAAAGAAH-- 397
            .|:|.|:||||.|||::..:.      :.|...:.....|.||      ...:.:.:|..|.|
  Fly   366 RQIKIWFQNRRMKWKKEHKMA------SMNIVPYHMGPYGHPYHQFDIHPSQFAHLSAXDAWHFS 424

  Fly   398 GATPHTNIDIY---YRQAAAAAAMQKPLPYNLYAGVP----SVGVGVGVGVGPAPFSHLSASSSL 455
            |.....| .:|   |:.||||:|..   .|....|.|    |||||.|.|   .|.|..:..|:.
  Fly   425 GTGXRLN-QLYQEPYQTAAAASAAS---GYQSQDGGPIGGGSVGVGGGAG---GPGSLANGGSNG 482

  Fly   456 SSLSSYYQSAAAAASA 471
            |..:|.:.|||:::.|
  Fly   483 SGPNSLFASAASSSQA 498

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	25/55 (45%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	27/58 (47%)