Protein Alignment B-H1 and Lmx1a

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Alignment Length: 507
• Identity: 96/507 - (18%)
• Similarity: 143/507 - (28%)
• Gaps: 219/507 - (43%)

  Fly    26 LSTLQQQH----HQHHLHYGLQPPAVAHSIHST-------TTMSSGGS-TTTASGIGKPNRSRFM 78
            |.:|||.|    ...:.:.|....:..:|:|.:       |::|...| |.|||..|:..:
  Fly    18 LYSLQQNHGGARFLDNPNPGSMTASSGNSLHLSNSNNNLPTSISGNNSPTATASLTGQHQQ---- 78

  Fly    79 INDILAGSAAAAFYKQQQHHQQLHH-------HNNNNNSG------------------SSGGSSP 118
                         ::||||.||..|       |...:.:.                  ||..|:.
  Fly    79 -------------HQQQQHQQQQQHPHQQHQQHQQQHAASTTPVPINSCPTPTGHSPLSSSSSNS 130

  Fly   119 AHSNNNNNINGDN--------CEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHGKLGHF 175
            .|:|||||.||.:        |.....|.|....:|                          ...
  Fly   131 NHNNNNNNNNGGSSSNNLHSACNTLTAAAVAAASAA--------------------------AVA 169

  Fly   176 PPTAGGNGLNVAQYAAAMQQHYAAAAAAAAA---------------------------------R 207
            .|:..|..:..:|...|:....|||||||||                                 .
  Fly   170 APSPAGTSVATSQLGGAVAAAIAAAAAAAAAATTPTSTGPAATGSGNANGSGNGNGNGNGNGNGN 234

  Fly   208 NNAAAAAAAAAAAAAAGVAAPPVDGGVDGG-------VGLAPPAGGDLDD-------SSDYHEEN 258
            .|.....||.|:||||...:....|..:.|       ..|....|..:.|       .:::||:.
  Fly   235 GNGNGGGAATASAAAASKLSADCSGRTEVGHIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQC 299

  Fly   259 EDCDSGNMDDHSVC--SNGG---KDD--------------------------------------- 279
            ..|....|..|..|  .|..   |.|
  Fly   300 LACCYCGMQLHHTCYVRNSKLYCKMDYDRLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCY 364

  Fly   280 ---------------DGN--------------SVKSGSTSDMSGLSKKQ-----------RKART 304
                           ||.              :..:.......||.::.           ::.||
  Fly   365 ACRLPLQKGEQFMLRDGQLFCYRHDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRT 429

  Fly   305 AFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            ..|..|.:..:.||::......:.|:.||....||...|:.|:||:|.|.|:
  Fly   430 ILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	17/55 (31%)
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	11/51 (22%)
		LIM	333..388	CDD:413332	2/54 (4%)
		Homeodomain	425..481	CDD:459649	17/55 (31%)