Protein Alignment B-H1 and Hoxd12

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001178832.1
• Gene: Hoxd12 / 366082
• RGDID: 1309797
• Length: 268
• Species: Rattus norvegicus
• Alignment Length: 228
• Identity: 56/228 - (24%)
• Similarity: 88/228 - (38%)
• Gaps: 58/228 - (25%)

  Fly   185 NVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGD-- 247
            |.:|.||.....|..:|...||...:...|....|:|..|.:.|.:.|  .|.:||..|...|
  Rat    32 NGSQLAALPPISYPRSALPWAATPASCTPAQPTTASAFGGFSQPYLTG--SGPIGLQSPGTKDGP 94

  Fly   248 -------LDDSSDYHEEN-----------------------EDCDSGNMDDHSV-------CSNG 275
                   ..|::...||.                       :....|.....||       |::.
  Rat    95 EDQVKFYTPDAATASEERSRTRPPFAPESSLVHSALKGTKYDFAGVGRAAPGSVTLLQGAPCASN 159

  Fly   276 GKDDDGNSVKSGSTSDMSGLSK-----------------KQRKARTAFTDHQLQTLEKSFERQKY 323
            .|:|....:.......::|::.                 :.||.|..:|..|:..||..|...::
  Rat   160 FKEDTKGPLNLNMAVQVAGVASCLRSSLPDGLPWGAAPGRARKKRKPYTKQQIAELENEFLVNEF 224

  Fly   324 LSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            ::.|:|:||:::|:|||.|||.|:||||.|.||
  Rat   225 INRQKRKELSNRLNLSDQQVKIWFQNRRMKKKR 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	25/55 (45%)
Hoxd12	NP_001178832.1	Homeodomain	201..257	CDD:459649	25/55 (45%)