DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H1 and Hlx

DIOPT Version :9

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001071142.1 Gene:Hlx / 364069 RGDID:1311961 Length:476 Species:Rattus norvegicus


Alignment Length:515 Identity:113/515 - (21%)
Similarity:181/515 - (35%) Gaps:121/515 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YGLQPPAV-------AHSIHSTTTMSSGGSTTTASGIGKPNRSRFMINDILAGSAAAAFYKQQQH 97
            :.|.|.||       |..:|              :|:|:|..:.    :.|.|::||.    ..|
  Rat    32 FALDPAAVKKPSFCIADILH--------------AGVGEPGPAA----EGLVGASAAL----TAH 74

  Fly    98 HQQLHHHNNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHP 162
            ...:|.|    .|..:...||...  ...:......|.....:..|.:|.|...|..|......|
  Rat    75 LGSVHPH----ASFQAAARSPLRP--TPVVAPSEVPAGFPQRLSPLSAAYHQHLPQQPPTQQQQP 133

  Fly   163 HALMHPHGKLGHF-PPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGV- 225
            .....|..:.|.. |||:|          ..:..|::.:|.|.::::.........:|.....| 
  Rat   134 QQQPPPPPRAGSLQPPTSG----------TRVVPHHSGSAPAPSSKDLKFGIDRILSAEFDPKVK 188

  Fly   226 -------AAPPVDGGVDGGV---GLAPPAG---GDLDDSSDYHEENEDCDSGNMDDHSVCSNGGK 277
                   ....:.||...||   ||.|.||   ..||..|               :.|...:...
  Rat   189 EGNTLRDLTSLLTGGRPTGVHLAGLQPSAGQFFASLDPIS---------------EASAILSPLS 238

  Fly   278 DDDGNSVKSGSTSDMSG-------------LSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQER 329
            .:..|||:........|             ..:|:..:|..|::.|.:.|||.||.|||::..:|
  Rat   239 SNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDR 303

  Fly   330 QELAHKLDLSDCQVKTWYQNRRTKWK--RQTAVGLELLAEAGNFAAFQRLYGGSPYLG----AWP 388
            ::||..|.|:|.|||.|:||||.||:  ::.....:...|||     ::..||.|..|    ..|
  Rat   304 KQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAG-----EKPSGGVPAEGEREERSP 363

  Fly   389 YAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVGVGVGVGVGPAPFSHLSASS 453
            ..:...|...::...::|:...........::.|.........:.|..:     .|..|...:|.
  Rat   364 SRSEGEAESESSDSESLDMAPSDTERTEGTERSLHQTTVIKASAAGALI-----TASSSASGSSF 423

  Fly   454 SLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASASPPPRPP 513
            |.||.||...|..:|.||::.|                 |...:.:|:|..|.:..|:.|
  Rat   424 SFSSSSSLGSSNGSAGSASSLG-----------------SNCSELLPSHQPSVTSGPQSP 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeobox 303..355 CDD:278475 26/51 (51%)
HlxNP_001071142.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..170 12/58 (21%)
COG5576 224..>341 CDD:227863 36/131 (27%)
Homeobox 276..330 CDD:395001 27/53 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..401 12/77 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..476 19/71 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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