DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Meox1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_063125617.1 Gene:Meox1 / 363684 RGDID:1308911 Length:328 Species:Rattus norvegicus


Alignment Length:444 Identity:84/444 - (18%)
Similarity:124/444 - (27%) Gaps:194/444 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 VLPSALHHPQPHPPT-----HPHTH-------PHALMHP---HGKLGHFPPTAGGNGLNVAQYAA 191
            |:.|.:.:|||..|.     :||:.       ||....|   |.| ..||.||.....:.:..||
  Rat     4 VVNSCVRNPQPPAPVWGCLRNPHSEGSSASGLPHYPPTPFSFHQK-SDFPATAAYPDFSTSCLAA 67

  Fly   192 A-----------MQQHYA---------AAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDG 236
            .           .:||.|         ..:.|....|...|.:|....|.:.|:    |||  .|
  Rat    68 TPHSLPRAERIFNEQHPAFPQTPDWHFPISEAGQRLNLGPAGSAREMGAGSPGL----VDG--TG 126

  Fly   237 GVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRK 301
            |:|                   |||.......|.                               
  Rat   127 GLG-------------------EDCMVLGTIAHE------------------------------- 141

  Fly   302 ARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKT------W-------YQNRRTK 353
                 |:.:|...:|  ||.....|.|.:......:....:|.|      |       ::.|.:|
  Rat   142 -----TEKKLSRRKK--ERSGQSVVPEPENEVEACEGGSARVPTGAGPRGWRLCSFSEFRVRCSK 199

  Fly   354 WKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAM 418
            .:.|         |..|...|| |...:|.|      .::|....|..|:.:|:           
  Rat   200 DQNQ---------ERLNERPFQ-LPPPTPTL------TSSGPTQAACAHSYVDV----------- 237

  Fly   419 QKPLPYNLYAGVPSVGVGVGVGVGPAPFSHLSASSSLS----SLSSYYQSAAAAASAANPGGPHP 479
                      .:||||.             |:....|:    ||||.:..|:...:..|..||..
  Rat   238 ----------KLPSVGA-------------LNFPEGLAQHRPSLSSPFPRASIFHTLLNSTGPSG 279

  Fly   480 VA-----------------PPPSVGGGSPPSGLVKPIPAHSASASPPPRPPSTP 516
            :.                 |.|::           |:....:|.|.|..|...|
  Rat   280 LGNSRNRTWDTLFWVSWLLPTPTI-----------PLLHQVSSGSGPIWPVQNP 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 12/68 (18%)
Meox1XP_063125617.1 None

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