DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and inv

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster


Alignment Length:461 Identity:103/461 - (22%)
Similarity:166/461 - (36%) Gaps:150/461 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KDSMSILTQTP---SEPNAAHP---------QLHHHLSTLQQQHHQHHLHYGLQPPAVAHSIHST 54
            :|:::.||.|.   ....|.||         |:|||      .|.|:||:..       .::|..
  Fly   224 QDALAQLTATALGLGPGGAVHPHQQLLLQRDQVHHH------HHMQNHLNNN-------ENLHER 275

  Fly    55 TTMSSGGSTTTASGIGKPNRSRFMINDILAGSAAAAFYKQQQHHQQLHHHNNNNNSGSSGGSSPA 119
            ..                   :|.|::||.....:...|       :...:.|...||..|||..
  Fly   276 AL-------------------KFSIDNILKADFGSRLPK-------IGALSGNIGGGSVSGSSTG 314

  Fly   120 HSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGL 184
            .|.|:.|.||:.             |.|..|:                           ..|..|
  Fly   315 SSKNSGNTNGNR-------------SPLKAPK---------------------------KSGKPL 339

  Fly   185 NVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVD----GGVDGGVGLAPPAG 245
            |:||..||.....:.:::.|...:|:..:.:.|.:::....:..|||    .....|.|....:|
  Fly   340 NLAQSNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASG 404

  Fly   246 GDLDDSSD--------YHEENEDCDSGNMDDH----------SVCSNGGKDDDGNSVKSGSTSDM 292
            ...:||..        |.....|..|......          |..:.||    |..|:.|..:|.
  Fly   405 KSGEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAGGG----GGGVEKGEAADG 465

  Fly   293 SGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQ 357
            .|:.:.:| .||||:..||..|:..|...:||:.:.||:|:.:|.|::.|:|.|:||:|.|.|:.
  Fly   466 GGVPEDKR-PRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKS 529

  Fly   358 TA----VGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNID---IYYRQAAAA 415
            :.    :.|:|:|        |.||.                 |...|.|..:   ...::||:|
  Fly   530 SGTKNPLALQLMA--------QGLYN-----------------HSTIPLTREEEELQELQEAASA 569

  Fly   416 AAMQKP 421
            ||.::|
  Fly   570 AAAKEP 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 23/55 (42%)
invNP_523699.3 Homeodomain 472..528 CDD:459649 23/56 (41%)
Engrail_1_C_sig 529..554 CDD:431338 8/49 (16%)

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