Protein Alignment B-H1 and Hmx1

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001101833.2
• Gene: Hmx1 / 360960
• RGDID: 1304928
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 493
• Identity: 109/493 - (22%)
• Similarity: 147/493 - (29%)
• Gaps: 223/493 - (45%)

  Fly    65 TASGIGKPNR-SRFMINDILA----GSAAAA------------------FYKQQQHHQQLHHHNN 106
            |..|...|.| |.|:|.::||    ||..||                  ...:|...::|.....
  Rat     6 TEPGRATPARASSFLIENLLAAEAKGSGRAAQGDGVREEEEEDDDDPEDEDPEQARRRRLQRRRQ 70

  Fly   107 NNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHAL------ 165
            .......||.:.|.:                .|:|          |.||..|.. |.||
  Rat    71 QRAGSGPGGEARARA----------------LGLG----------PRPPPGPGP-PFALGCGGAT 108

  Fly   166 -MHPHGKLGH----FPPTAG------GNGLNVAQYA-------AAMQQHYAAAAAAAAARNNAAA 212
             .:|..:.|:    .|.|:.      |..:..|:.|       .|:.:.......||.....|..
  Rat   109 RWYPRAQGGYGGGLSPDTSDRDSPETGEDMGRAESAWPRCPGPGAVPREVTTQGPAAGGEEAAEL 173

  Fly   213 AAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGK 277
            |.|.|.||||||.|                                               .||
  Rat   174 AEAPAVAAAAAGEA-----------------------------------------------RGG- 190

  Fly   278 DDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQ 342
                                :::|.||.|:..|:..||.:|:.::|||..||..||..|.|::.|
  Rat   191 --------------------RRKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQ 235

  Fly   343 VKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDI 407
            ||.|:||||.|||||.|..||                           ||:.:..||.....:.:
  Rat   236 VKIWFQNRRNKWKRQLAAELE---------------------------AASLSPPGAQRLVRVPV 273

  Fly   408 YYRQAAAAAAMQKPLPYNLYAGVPSVGVGVGVGVGPA-PFSHLSASSSLSSLSSYYQSAAAAASA 471
            .|.::..||                        .||. ||
  Rat   274 LYHESPPAA------------------------TGPTLPF------------------------- 289

  Fly   472 ANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASASPP 509
              |..|...||||.:.|.|  ..|..|:.|..|:||.|
  Rat   290 --PLAPPAPAPPPPLLGFS--GALAYPLAAFPAAASVP 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	27/55 (49%)
Hmx1	NP_001101833.2	Homeodomain	193..249	CDD:459649	27/55 (49%)