DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and nkx3-2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_073777336.1 Gene:nkx3-2 / 337865 ZFINID:ZDB-GENE-030127-1 Length:255 Species:Danio rerio


Alignment Length:144 Identity:53/144 - (36%)
Similarity:74/144 - (51%) Gaps:23/144 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 DLDDSSDYHE-ENEDCDSGNMDDH----SVCSNGGKD------DDGNSVKSG---------STSD 291
            |..:.||..| :|.|.|||..:|:    .:.:...||      .|..|...|         :..:
Zfish    56 DAPERSDETEHKNYDSDSGLSEDNDAKAQIDAKPEKDADLADETDQESAAKGLSDCVSDCNTAEE 120

  Fly   292 MSGLSKKQRK--ARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKW 354
            .||.:.||||  :|.||:..|:..||:.|..|:|||..||.:||..|.|::.|||.|:||||.|.
Zfish   121 KSGDAPKQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKT 185

  Fly   355 KRQTAVGLELLAEA 368
            ||: .:..:|||.|
Zfish   186 KRR-QMAADLLASA 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/57 (49%)
nkx3-2XP_073777336.1 None

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