DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Pph13

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster


Alignment Length:308 Identity:73/308 - (23%)
Similarity:110/308 - (35%) Gaps:105/308 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 DMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWK 355
            |...:.:|||:.||.|...|||.||::|:|..|..|..|:|||.::||::.:|:.|:||||.||:
  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66

  Fly   356 RQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQK 420
            :|..:|       |        .||....||                .::|:.|..:|....:..
  Fly    67 KQEKIG-------G--------LGGDYKEGA----------------LDLDVSYDDSAVLGQLDS 100

  Fly   421 PLPYNLYAGVPSVGVGVGVGVGPAPFSHLSASSSL-SSLSSYYQSAAAAASAANP---------- 474
            .|               |.|....|.:...:|:|| :.|.:.|.:.|.:.|..:|          
  Fly   101 AL---------------GGGGTLLPDTPPQSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDH 150

  Fly   475 -----GG-----PHPVAPPPSVGGGSPPSGLVKPIPAHSASASPPPRPPSTP------------- 516
                 ||     .....||.:.....|.......:..|     ||.:..|.|             
  Fly   151 LGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQH-----PPQQHASDPIHAGSSSHHQQQQ 210

  Fly   517 --------SPTLNPGSPPGRSV-----DSCSQSD-------DEDQIQV 544
                    :|.|:||.....|:     |..|..|       |.||..:
  Fly   211 QQHQQEQHNPQLHPGLEFAASLSLDMTDGSSAYDEMKFLSVDVDQFTI 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 27/55 (49%)

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