DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and B-H2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster


Alignment Length:700 Identity:257/700 - (36%)
Similarity:313/700 - (44%) Gaps:236/700 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKDSMSILTQTP--SEPNAAHPQLHHHLSTLQQQHHQHHLHYGLQPPAVAHSIHSTTTMSSGGST 63
            |...||..|..|  |.|:|.                .||      |.||...:....:.:.|.:|
  Fly     4 MPPEMSATTAAPVGSAPSAT----------------AHH------PAAVGGGMPRPASPAVGSNT 46

  Fly    64 TTASGIGKPNRSRFMINDILAGSAAA------------------------------AFYKQQQHH 98
            |||:.. ...||||||.|||||:|||                              :...|..||
  Fly    47 TTATAT-TATRSRFMITDILAGAAAASAAAAAAAAALAAASSGGGRGSPTDSEREQSLVAQHHHH 110

  Fly    99 ---QQLHHHNNNNNSGSSGGSSP------------------------AHSNNNNNINGDNCEASN 136
               ||.|||:...........:.                        .|....::..|:|     
  Fly   111 HQQQQQHHHHQQQQQQQQHQQAALQQYIVQQQQLLRFEREREREREREHYRERHSPPGNN----- 170

  Fly   137 VAGVGVLPSALHHPQP------HPPTH--------------PHTHPHALM-----------HPHG 170
                   |.| |||.|      .||.|              .|.|||.|.           |.||
  Fly   171 -------PYA-HHPMPPHLLAHFPPAHYAVLQQQQQQQQQQQHPHPHHLQLERERLEALHRHGHG 227

  Fly   171 KLG---------------------HFP------------PTAGGNGLNVAQYAAAMQQHYAAAAA 202
            ..|                     |.|            ...||||.|      ....:..:::|
  Fly   228 LTGDPAQHLSHLSHLSHQQHHPHLHHPMHDERSRSPLMLQQLGGNGGN------NNNNNNNSSSA 286

  Fly   203 AAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPA---GGD----LDDSSDYHEENED 260
            :....||..:|:|.:...:....::...:|..:|.:.|..|.   .||    :|||     :::|
  Fly   287 SNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDS-----DSDD 346

  Fly   261 CDSGNMDDHSVCSNGGKDDDG-NSVKSGSTS--DMS-----GLSKKQRKARTAFTDHQLQTLEKS 317
            |             ||||||| :|:|:||::  |.|     .|||||||||||||||||||||||
  Fly   347 C-------------GGKDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKS 398

  Fly   318 FERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLYGG-S 381
            ||||||||||:|.|||:||:|||||||||||||||||||||||||||||||||:||||||||| :
  Fly   399 FERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAAFQRLYGGAT 463

  Fly   382 PYLGAWPYAAAAGA--AHGATPHTNIDIYYRQAAAAAAMQKP-LP--YNLYAGVPSVGVGVGVGV 441
            |||.||||||||.|  .||||| :.||||||||||||||||| ||  |.:|..  |:..|:.:..
  Fly   464 PYLSAWPYAAAAAAQSPHGATP-SAIDIYYRQAAAAAAMQKPSLPASYRMYQS--SIPPGMSLPG 525

  Fly   442 GPAPFSHLSASSSLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASA 506
            .|||    ....:...||.||  |||||:||:.|.......||:....          ||.|.||
  Fly   526 MPAP----PPPGAAPMLSGYY--AAAAAAAASAGAQQQQQQPPAASRS----------PATSQSA 574

  Fly   507 SPP---PRPPS-------TPSPTLNPGSPPGR---SVDSCSQSDDEDQIQ 543
            :..   .|..|       ||||.|||||||.|   :.:...:.|:|..|:
  Fly   575 NSEADCERTSSSSRQRLITPSPPLNPGSPPHRERINEEEDRERDEERDIE 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 51/55 (93%)
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 51/55 (93%)

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