DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H1 and hlx1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001418073.1 Gene:hlx1 / 327096 ZFINID:ZDB-GENE-030131-5304 Length:357 Species:Danio rerio


Alignment Length:247 Identity:58/247 - (23%)
Similarity:107/247 - (43%) Gaps:34/247 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 HSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHP----HG-------KLG 173
            |..:..||.|.:...:::.....:.|:....:|.|.|     |.|.:||    ||       .:.
Zfish    42 HVGDAENIQGSSSLMAHIGARAQVHSSGSPLRPSPVT-----PDARLHPAYLRHGIHLTSRAAIN 101

  Fly   174 HFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGV 238
            ..|||:......:.:..:.  .....:..:.:.|:  ..:..:....:|..|:|.|....:|..:
Zfish   102 APPPTSKDLKFGIDRILST--DFEPKSKESPSLRD--LTSIVSPNRQSAVHVSASPYFASIDPTM 162

  Fly   239 GLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKAR 303
            .......|.:.:::....:::..|:.....::|.|   ||....:.|           :|:..:|
Zfish   163 SETSSLMGSIGNAARQSGQHQFQDTFPGRPYAVLS---KDTMPQTYK-----------RKRSWSR 213

  Fly   304 TAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWK 355
            ..|::.|.:.|||.||.|||::..:|::||..|.|:|.|||.|:||||.||:
Zfish   214 AVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWR 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/56 (48%)
hlx1NP_001418073.1 Homeodomain 206..266 CDD:459649 29/71 (41%)

Return to query results.
Submit another query.