DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and HOXC13

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_059106.2 Gene:HOXC13 / 3229 HGNCID:5125 Length:330 Species:Homo sapiens


Alignment Length:314 Identity:73/314 - (23%)
Similarity:105/314 - (33%) Gaps:108/314 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHGKLGHF 175
            |...|:||..:.:.:.: |.:|.||                         |...|: ||..||. 
Human    44 GGCSGASPGKAPSMDGL-GSSCPAS-------------------------HCRDLL-PHPVLGR- 80

  Fly   176 PPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGL 240
            ||         |...|.....|....|..|||..|...|...:::|..|...|  .||...|..|
Human    81 PP---------APLGAPQGAVYTDIPAPEAARQCAPPPAPPTSSSATLGYGYP--FGGSYYGCRL 134

  Fly   241 A------------------PPAGGDL--DDSSDYHEE---------NEDCDSGNMD--------- 267
            :                  |...|.|  ||.|...:|         :.....|.:|         
Human   135 SHNVNLQQKPCAYHPGDKYPEPSGALPGDDLSSRAKEFAFYPSFASSYQAMPGYLDVSVVPGISG 199

  Fly   268 ---------------DHSVCSNGGKDDDGNSVKSGSTS---------DMSGLS------KKQRKA 302
                           .|...|||. |......|..|.|         |:..|.      ::.||.
Human   200 HPEPRHDALIPVEGYQHWALSNGW-DSQVYCSKEQSQSAHLWKSPFPDVVPLQPEVSSYRRGRKK 263

  Fly   303 RTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            |..:|..||:.|||.:...|:::.::|:.::...:||:.||..|:||||.|.|:
Human   264 RVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKK 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 21/55 (38%)
HOXC13NP_059106.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..50 2/5 (40%)
HoxA13_N 54..168 CDD:463521 34/152 (22%)
Homeodomain 261..312 CDD:459649 18/50 (36%)

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