DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and HOXC6

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_004494.1 Gene:HOXC6 / 3223 HGNCID:5128 Length:235 Species:Homo sapiens


Alignment Length:248 Identity:52/248 - (20%)
Similarity:91/248 - (36%) Gaps:72/248 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 THPHALMHPHGKLGHFPPTAGGNGL--NVAQYAAAMQ--QHYAAAAAAAAARNNAAAAAAAAAAA 220
            |:|....|          .|||..:  |||..:.|..  :|::...||.|.....:....:....
Human     6 TNPSLSCH----------LAGGQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQEN 60

  Fly   221 AAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVK 285
            .....:..|.|.|                 |:.:::|.:           :.||..::..|::.:
Human    61 VVFSSSRGPYDYG-----------------SNSFYQEKD-----------MLSNCRQNTLGHNTQ 97

  Fly   286 SGSTSDMS------------------------------GLSKKQRKARTAFTDHQLQTLEKSFER 320
            :....|.|                              |....:|:.|..::.:|...|||.|..
Human    98 TSIAQDFSSEQGRTAPQDQKASIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHF 162

  Fly   321 QKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAA 373
            .:||:.:.|.|:|:.|.|::.|:|.|:||||.|||:::.:...|....|...|
Human   163 NRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGATA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 23/55 (42%)
HOXC6NP_004494.1 Antp-type hexapeptide 122..127 0/4 (0%)
Homeodomain 142..198 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..235 3/16 (19%)

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