DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and HOXA13

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_000513.2 Gene:HOXA13 / 3209 HGNCID:5102 Length:388 Species:Homo sapiens


Alignment Length:416 Identity:85/416 - (20%)
Similarity:114/416 - (27%) Gaps:233/416 - (56%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 NNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHG 170
            |.|..|::..::.|.:           .|:..||.|..|                ||.|      
Human    32 NKNMEGAAAAAAAAAA-----------AAAAGAGGGGFP----------------HPAA------ 63

  Fly   171 KLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARN-------------------------NA 210
                  ..|||| .:||..|||     ||||||...||                         :|
Human    64 ------AAAGGN-FSVAAAAAA-----AAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSA 116

  Fly   211 AAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNG 275
            |||||||||||||..||     ...||.|.|.|||.         |..:.|        |.||..
Human   117 AAAAAAAAAAAAAAAAA-----SSSGGPGPAGPAGA---------EAAKQC--------SPCSAA 159

  Fly   276 GKDDDG-----------------------NSVKS------------------------------- 286
            .:...|                       |::||                               
Human   160 AQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFADKYMDTAGPAAEEFSSR 224

  Fly   287 ----------------------------------------------------------------- 286
                                                                             
Human   225 AKEFAFYHQGYAAGPYHHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQM 289

  Fly   287 ---------------------GSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQ 330
                                 ...||.|.. ::.||.|..:|..||:.||:.:...|:::..:|:
Human   290 YCPKEQAQPPHLWKSTLPDVVSHPSDASSY-RRGRKKRVPYTKVQLKELEREYATNKFITKDKRR 353

  Fly   331 ELAHKLDLSDCQVKTWYQNRRTKWKR 356
            .::...:||:.||..|:||||.|.|:
Human   354 RISATTNLSERQVTIWFQNRRVKEKK 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 20/55 (36%)
HOXA13NP_000513.2 HoxA13_N 85..224 CDD:463521 34/160 (21%)
Homeodomain 323..379 CDD:459649 20/55 (36%)

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