Protein Alignment B-H1 and Vsx1

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Alignment Length: 709
• Identity: 147/709 - (20%)
• Similarity: 213/709 - (30%)
• Gaps: 317/709 - (44%)

  Fly    12 PSEPNAAHPQLHHHLSTLQ-------------------QQHHQHHLHYGLQPPAVAHS------- 50
            |....|||   |||::||.                   :.|.|.|........|.|..
  Fly   134 PGNAAAAH---HHHMTTLAAAAYLRGFLPPGFSTPHEFRGHFQQHFGAQFAEQAAARGQEYASSL 195

  Fly    51 ----------IHSTTTMSSGGSTTTASGIGKPNRSRFMINDILAGSAAAAFYKQQQHHQQLHHHN 105
                      ..::::..:|||..:.||.|..|.:...:..:  ||..|
  Fly   196 ANASGDEQSPSKNSSSSGNGGSGGSGSGSGGGNPTSNGLGHL--GSPTA---------------- 242

  Fly   106 NNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALMHPHG 170
              :|.||.||:....|...:..:|.|...|...|.|                            |
  Fly   243 --SNGGSGGGAGVGGSGGGSGTSGSNSSTSGNGGNG----------------------------G 277

  Fly   171 KLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAA-------------------- 215
            ..|.....||      ..::||:..|..||||||||.::||||||
  Fly   278 SSGSRSSPAG------PHHSAALAAHQHAAAAAAAAHHHAAAAAAAHHAHHAHAQAHAHAHAHVH 336

  Fly   216 --AAAAAAAAGVAAPPVDG--GVDGGVGLAPPA-----GGDLDDSSDYHEENEDCDSGNMDDHSV 271
              ||.||.||...|...:.  |..||.|..|.:     |||:                      :
  Fly   337 AHAAHAAHAAHAHAHHAEAFLGAAGGAGGNPNSLLAAHGGDV----------------------L 379

  Fly   272 CSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKL 336
            ...||....|..            ..|:|..||.||..||:.|||:|:...|..|..|:.|:.|.
  Fly   380 VGPGGTGPGGKK------------KNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKT 432

  Fly   337 DLSDCQVKTWYQNRRTKWKR----------------------------QTAV------------- 360
            .|::.:::.||||||.||::                            :|.:
  Fly   433 GLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGAMVRHSLPLPETIIKSAKEDESVAPWL 497

  Fly   361 ---------GLELLA------------------EAG--------NFAAFQRLYGGSPYLGAWPYA 390
                     ..|||.                  .||        :|:..:.|:...|     |.|
  Fly   498 LGMHKKSLEAAELLKSDESDRETPTSDDTNTSYSAGSTHNSPISSFSISRLLFDAPP-----PAA 557

  Fly   391 AAAGA---------------AH---GATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSV---- 433
            .:||.               ||   .|..|.::.::::|.......|:...::|:|...|:
  Fly   558 GSAGGKGHHHHHHHHKGHHHAHVHAQAQAHAHMLLHHQQQQQQQQQQQQHHHHLHAAENSLQQQQ 622

  Fly   434 ----------GVGVGVGVG----PA--PFS---HLSASSSLS----------------------- 456
                      |.|.|.|.|    ||  |::   ||.....|.
  Fly   623 VAGTGSGSGSGSGSGTGAGSTGPPAHHPYNQQQHLHHLQQLQQQQQQQQQQAQQQQQHHHHQHHH 687

  Fly   457 --------SLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASAS 507
                    :.::.|..||.||:||        |...:....:..:.....:.|.|||||
  Fly   688 SVHHMHHHNAAAGYAEAAVAAAAA--------AAAVAAAANARNAAAAAAVAAASASAS 738

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	25/55 (45%)
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	25/56 (45%)