DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and nkx2.2a

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571497.2 Gene:nkx2.2a / 30697 ZFINID:ZDB-GENE-980526-403 Length:273 Species:Danio rerio


Alignment Length:191 Identity:56/191 - (29%)
Similarity:79/191 - (41%) Gaps:46/191 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 SGNMDDHSVCS---NGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYL 324
            |.|..|.|..|   :..:..|.:...|.:.||    |.|:||.|..|:..|...||:.|.:|:||
Zfish    94 SANSQDTSAKSPEPSADESPDNDKETSSNGSD----SGKKRKRRVLFSKAQTYELERRFRQQRYL 154

  Fly   325 SVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTA--------------VGLELLAEAGN----- 370
            |..||:.||..:.|:..|||.|:||.|.|.||..|              |.:.:|...|.     
Zfish   155 SAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTHLPSPRRVAVPVLVRDGKPCHTL 219

  Fly   371 -----FAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNL 426
                 .|.||   .|.|:..   |:|.      :..|...:.:|   :||...|.|..::|
Zfish   220 KAQDLAATFQ---AGIPFSA---YSAQ------SLQHMQYNAHY---SAATTPQFPTAHHL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 25/55 (45%)
nkx2.2aNP_571497.2 COG5576 93..218 CDD:227863 42/127 (33%)
Homeodomain 130..186 CDD:459649 25/55 (45%)

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