DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and emx3

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571354.1 Gene:emx3 / 30536 ZFINID:ZDB-GENE-990415-53 Length:233 Species:Danio rerio


Alignment Length:112 Identity:42/112 - (37%)
Similarity:65/112 - (58%) Gaps:14/112 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAV 360
            |:|.::.||||:..||..||::||:..|:...||::||:.|.|::.|||.|:||||||.|||   
Zfish   132 SRKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANGLCLTETQVKVWFQNRRTKHKRQ--- 193

  Fly   361 GLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDI 407
              :|..|:.:   .|:...||.::..|..|...|:..      :||:
Zfish   194 --KLEEESPD---PQQKRKGSQHVSRWRVATQQGSPE------DIDV 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
emx3NP_571354.1 Homeodomain 136..192 CDD:459649 27/55 (49%)

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