DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hoxd13a

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571244.2 Gene:hoxd13a / 30407 ZFINID:ZDB-GENE-990415-119 Length:256 Species:Danio rerio


Alignment Length:78 Identity:26/78 - (33%)
Similarity:45/78 - (57%) Gaps:2/78 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 KSGSTSDMSGLS--KKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWY 347
            |...|.:.:..|  ::.||.|..:|..||:.||:.:...|:::.:.|:.:|...:||:.||..|:
Zfish   175 KPSLTEEAAAASFCQRGRKKRVPYTKFQLKELEREYNTTKFITKENRRRIASSTNLSERQVTIWF 239

  Fly   348 QNRRTKWKRQTAV 360
            ||||.|.|::..|
Zfish   240 QNRRVKDKKRPDV 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 21/55 (38%)
hoxd13aNP_571244.2 Homeodomain 192..248 CDD:459649 21/55 (38%)

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