DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hoxa11b

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571222.1 Gene:hoxa11b / 30382 ZFINID:ZDB-GENE-990415-4 Length:283 Species:Danio rerio


Alignment Length:262 Identity:63/262 - (24%)
Similarity:96/262 - (36%) Gaps:85/262 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 QQLHHHNNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGV----GVLPSALHHPQPHPPTHPH 159
            :.:.|....:|.|:.|  .....||:...:.::...|||.|.    ||||.|             
Zfish    88 EDMVHRECLSNPGTLG--DMLSKNNSVLYHSNSSHTSNVYGSVGRNGVLPQA------------- 137

  Fly   160 THPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAG 224
                        ...|..||.||                                          
Zfish   138 ------------FDQFFETAYGN------------------------------------------ 148

  Fly   225 VAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGST 289
            |...|.:..||.....|||......||....:|.|.|:..:..:.   |:|..:|.    .|||:
Zfish   149 VENQPTEHPVDRATSKAPPPAESGSDSCRGTDETERCEETSSPEP---SSGNNEDK----FSGSS 206

  Fly   290 SDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKW 354
            :     .:|.||.|..:|.:|::.||:.|....|::.::|.:|:..|:|:|.|||.|:||||.|.
Zfish   207 N-----GQKTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKE 266

  Fly   355 KR 356
            |:
Zfish   267 KK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 23/55 (42%)
hoxa11bNP_571222.1 DUF3528 26..151 CDD:432284 21/131 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..215 20/76 (26%)
Homeodomain 212..268 CDD:459649 23/55 (42%)

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