DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hoxb1b

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:277 Identity:62/277 - (22%)
Similarity:92/277 - (33%) Gaps:83/277 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 HNNNNNSGSSGGSSPAHSNNNNNINGDN--CEASNVAGVGVLPSALHHPQPHPPTHPHTHPHALM 166
            |..:..|.:...|.|.|.|.:....|.:  |:                 |..||...:.|.|.|.
Zfish    58 HETHGTSYAQIQSQPFHLNVDMGKTGHSNFCK-----------------QTRPPHSDYGHQHVLT 105

  Fly   167 H--PHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPP 229
            .  .|.:|.....:....|.|:..|                :.:|....:.:|:...:.....|.
Zfish   106 QADDHMRLQSPGFSVVNMGANIGTY----------------SESNCRPGSVSASHYQSYAYGEPE 154

  Fly   230 VDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMS- 293
            ..|                ..|...::.:.|.||               |...::|...|.|.. 
Zfish   155 PHG----------------YGSFSKYQVSPDSDS---------------DSKTNIKQAPTFDWMK 188

  Fly   294 --------------GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVK 344
                          |:..:|...||.||..||..|||.|...|||:...|.|:|..|:|::.|||
Zfish   189 VKRNPPKTVKVAEYGIHGQQNIIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVK 253

  Fly   345 TWYQNRRTKWKRQTAVG 361
            .|:||||.|.|::...|
Zfish   254 IWFQNRRMKQKKREKEG 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 5/33 (15%)
Antp-type hexapeptide 183..188 2/4 (50%)
Homeodomain 212..265 CDD:459649 27/52 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 1/6 (17%)

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