DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Dlx4

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001100510.1 Gene:Dlx4 / 303469 RGDID:1308744 Length:238 Species:Rattus norvegicus


Alignment Length:217 Identity:55/217 - (25%)
Similarity:86/217 - (39%) Gaps:51/217 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 LPSALHHPQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQ-YAAAMQQHYAAAAAAAAA 206
            ||..|....|.....|...|.:.:....:||..|.||....|:.:| |...:...|...|.    
  Rat     4 LPCPLPGLGPSNVVFPDLAPASSVVAAYQLGLSPGTAASPDLSFSQTYGHLLSYSYPGPAT---- 64

  Fly   207 RNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSV 271
                                  |.|..:......|.|       |..:|:..|         |. 
  Rat    65 ----------------------PGDSYLSSQQQSAAP-------SRPFHQPTE---------HP- 90

  Fly   272 CSNGGKDDDGNSVKSGSTSDMS--GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAH 334
                 ::.:..|.|...:.:.|  .|::|.||.||.::..|||.|.:.|:..:||::.||.:||.
  Rat    91 -----QELEAESEKLALSLEPSQPSLTRKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAA 150

  Fly   335 KLDLSDCQVKTWYQNRRTKWKR 356
            :|.|:..|||.|:||:|:|:|:
  Rat   151 QLGLTQTQVKIWFQNKRSKYKK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 25/55 (45%)
Dlx4NP_001100510.1 Homeodomain 116..172 CDD:459649 25/55 (45%)

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