DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B-H1 and hoxb4a

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:163 Identity:49/163 - (30%)
Similarity:70/163 - (42%) Gaps:39/163 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 AGVAAPPVDG--GVDGGVGLAPPAGGDLDD---SSDYHEENEDCDSGNMDDHSVCSNGGKDDDGN 282
            :|.|.||...  |......:..|.|..|..   |:...|.:..|||........|        |.
Zfish    56 SGCADPPYSSCQGPGQPAAVISPRGHVLPTTALSTPLPEPSHHCDSVTPSPPPAC--------GQ 112

  Fly   283 SVKSGSTSDMSGLSKKQ------------------------RKARTAFTDHQLQTLEKSFERQKY 323
            :..|.:||.:|  |:|.                        :::|||:|..|:..|||.|...:|
Zfish   113 TPTSQNTSTVS--SRKDPVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRY 175

  Fly   324 LSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            |:.:.|.|:||.|.||:.|:|.|:||||.|||:
Zfish   176 LTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 19/78 (24%)
Antp-type hexapeptide 130..135 0/4 (0%)
Homeodomain 152..208 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.