DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and hoxb2a

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:458 Identity:96/458 - (20%)
Similarity:137/458 - (29%) Gaps:184/458 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 DNCEASNVAGVGVLPSALHH--PQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAA 192
            ::.:.|::.....:|....|  |...|.|.....|.:           ......|||.:....|.
Zfish    30 ESFQTSSIKDSTAIPPPFEHTIPSLSPCTGNQARPRS-----------QKRTASNGLQLRTQTAP 83

  Fly   193 MQQHYAAAAAAAAA--------------------RNNAAAAAAAAAAAAA------AGVAAP-PV 230
            ..||....|..:..                    :..|.||||||:.:.|      ||:.:| .:
Zfish    84 PTQHQQGPAPLSGGAPLAHEFPWMKEKKSSKKCPKPGATAAAAAASPSQASSGYTTAGLESPTEI 148

  Fly   231 DGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGL 295
            .||:|                                                       ::|| 
Zfish   149 QGGLD-------------------------------------------------------NVSG- 157

  Fly   296 SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAV 360
               .|:.|||:|:.||..|||.|...|||....|.|:|..|||::.|||.|:||||.|.||||. 
Zfish   158 ---SRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTT- 218

  Fly   361 GLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYN 425
                                                           ::|.....    :|..::
Zfish   219 -----------------------------------------------HHRDGQEG----EPSGFD 232

  Fly   426 LYAGVPSVGVGVGVGVGPAPFSHLSASSSLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGS 490
            |..|..:          .:|:|..|...|.|..::..:|.....:||.........|.|..|..|
Zfish   233 LLEGTDA----------SSPYSSQSLEVSGSGSAAPSESETCPTTAAYTNSSDKSQPTPEEGQAS 287

  Fly   491 PPSGLVKPIPAHSASASPPPRPPSTPSP-TLNPGSPPGR-------------------SVDSCSQ 535
            .|.....|   .:|..|||...|:..:| |:..|...|.                   |.|||.|
Zfish   288 QPEPASVP---DTAVHSPPYPTPTADNPTTMAEGRAAGPEHSFTEPQDATSLPDLNFFSTDSCLQ 349

  Fly   536 SDD 538
            ..|
Zfish   350 ISD 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 29/55 (53%)
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73 6/43 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 4/18 (22%)
Antp-type hexapeptide 103..108 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 14/101 (14%)
Homeodomain 159..215 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 32/191 (17%)
PRK11907 237..>320 CDD:237019 22/95 (23%)

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