Protein Alignment B-H1 and Hmx3

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001099772.1
• Gene: Hmx3 / 293537
• RGDID: 1559927
• Length: 356
• Species: Rattus norvegicus
• Alignment Length: 476
• Identity: 110/476 - (23%)
• Similarity: 146/476 - (30%)
• Gaps: 233/476 - (48%)

  Fly   125 NNINGDNCEASNVAGVGVLPSALHH---PQPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNV 186
            |.:|||                 ||   |:|.||      |..|..|
  Rat    35 NLLNGD-----------------HHRPPPKPQPP------PRTLFAP------------------ 58

  Fly   187 AQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGL----------- 240
                       |:|||||||   ||||||..|...|||.|...|     |.:..
  Rat    59 -----------ASAAAAAAA---AAAAAAKGALEGAAGFALSQV-----GDLAFPRFEIPAQRFA 104

  Fly   241 --------AP---------PAGGDLD-----------DSS------------------DYHE--- 256
                    :|         ||||.|.           |||                  |:.|
  Rat   105 LPAHYLERSPAWWYPYTLTPAGGHLPRPEASEKALLRDSSPASGTDRDSPDPLLKADPDHKELDS 169

  Fly   257 --------ENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSK-------KQRKARTAF 306
                    |..|.:.|..:..:|....|......:...||....:|...       :::|.||.|
  Rat   170 KSPDEIILEESDSEEGKKEGEAVPGAAGTTVGATAATPGSEDWKAGADSPEKKPACRKKKTRTVF 234

  Fly   307 TDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNF 371
            :..|:..||.:|:.::|||..||..||..|.|::.|||.|:||||.|||||.|..||
  Rat   235 SRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELE-------- 291

  Fly   372 AAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVGVG 436
                                ||..:|              |||...::.|:
  Rat   292 --------------------AANLSH--------------AAAQRIVRVPI-------------- 308

  Fly   437 VGVGVGPAPFSHLSASSSLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGSPPSGLVKPIPA 501
                                   .|::::||..:||..|.|.||:.|.          |..|.|.
  Rat   309 -----------------------LYHENSAAEGAAAAAGAPVPVSQPL----------LTFPHPV 340

  Fly   502 HSASASPPPRPPSTPSPTLNP 522
            :.:      .|..:..|.|.|
  Rat   341 YYS------HPVVSSVPLLRP 355

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	27/55 (49%)
Hmx3	NP_001099772.1	Homeodomain	228..284	CDD:459649	27/55 (49%)