DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Dbx1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001009644.1 Gene:Dbx1 / 292934 RGDID:1308896 Length:335 Species:Rattus norvegicus


Alignment Length:251 Identity:59/251 - (23%)
Similarity:85/251 - (33%) Gaps:104/251 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQT 358
            |..::....|..|:|.|.:.|||:|::|||:|..:|::||.||.|.|.|||.|:||||.||:...
  Rat   176 GKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRNSK 240

  Fly   359 AVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLP 423
            .  .|||:..|                                               ..::.||
  Rat   241 E--RELLSSGG-----------------------------------------------CREQTLP 256

  Fly   424 YNLYAGVPSVGVGVGVGVGPAPFSHLSASSSLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGG 488
            ..|               .|.|           .||...|.        .||.....:|..|:..
  Rat   257 TKL---------------NPHP-----------DLSDVGQK--------GPGDEEEDSPGASLAY 287

  Fly   489 GSPPSG---LVKPIPAHSASASPPPRPPSTPSPTLNPGSPPGRSVDSCSQSDDEDQ 541
            .:||..   |..|:||..|.:|.|.:|                  ...|.||::::
  Rat   288 HAPPDPRHLLEGPLPASPAHSSSPGKP------------------SDFSDSDEDEE 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 29/55 (53%)
Dbx1NP_001009644.1 PRK12323 <49..182 CDD:481241 1/5 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..102
Homeodomain 184..238 CDD:459649 29/53 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 29/187 (16%)
Blue background indicates that the domain is not in the aligned region.

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