DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Meox2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_058845.2 Gene:Meox2 / 29279 RGDID:3079 Length:303 Species:Rattus norvegicus


Alignment Length:340 Identity:82/340 - (24%)
Similarity:116/340 - (34%) Gaps:116/340 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QHHLHYGLQPP-AVAHSIH--STTTMSSGG----------STTTASGI--GKPNRSRFMINDILA 84
            :|.|...|:.| |.|..:|  |.::::..|          ||:::|.|  |.||..         
  Rat     2 EHPLFGCLRSPHATAQGLHPFSQSSLALHGRSDHMSYPELSTSSSSCIIAGYPNEE--------- 57

  Fly    85 GSAAAAFYKQQQHHQQLHHHNNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHH 149
            |..|:..::...||...|||::......:                             |.|..|.
  Rat    58 GMFASQHHRGHHHHHHHHHHHHQQQQHQA-----------------------------LQSNWHL 93

  Fly   150 PQPHPPTHPHTHPHALMHPHG---KLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAA 211
            ||...|.....|...|....|   :||..||....|                         :::.
  Rat    94 PQMSSPPSAARHSLCLQPDSGGPPELGSSPPVLCSN-------------------------SSSL 133

  Fly   212 AAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGG 276
            .::....||.|.|          |.|.....||..:....|....::.|...||.          
  Rat   134 GSSTPTGAACAPG----------DYGRQALSPAEVEKRSGSKRKSDSSDSQEGNY---------- 178

  Fly   277 KDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDC 341
                           .|.::.|.||.|||||..|::.||..|....||:...|.|:|..|||::.
  Rat   179 ---------------KSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTER 228

  Fly   342 QVKTWYQNRRTKWKR 356
            |||.|:||||.||||
  Rat   229 QVKVWFQNRRMKWKR 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 29/55 (53%)
Meox2NP_058845.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..191 35/216 (16%)
Homeodomain 187..243 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..303
Blue background indicates that the domain is not in the aligned region.

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