Protein Alignment B-H1 and Hoxb9

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001093967.1
• Gene: Hoxb9 / 287647
• RGDID: 1306158
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 242
• Identity: 64/242 - (26%)
• Similarity: 96/242 - (39%)
• Gaps: 50/242 - (20%)

  Fly   148 HHPQPHPPTHPHTHPHALMHPHGKLGH--FP--------PTAGGNGLNVAQYAAA---------M 193
            |..:..||....:..:|.....|...|  ||        |..|.:...::.:|:.         :
  Rat    18 HESEDAPPAKFPSGQYANPRQPGHAEHLDFPSCSFQPKAPVFGASWAPLSPHASGSLPSVYHPYL 82

  Fly   194 QQHYAAAAAAAAARN--NAAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAGGDL--DDSSDY 254
            |...|.||.:...|.  ..|..|.||.....|.|.|.|:.|           |.|:|  ..:.:|
  Rat    83 QPQGAPAAESRYLRTWLEPAPRAEAAPGQGQAAVKAEPLLG-----------APGELLKQGTPEY 136

  Fly   255 HEE----------NEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDH 309
            ..|          |:....|   |:.:| .|.:|.:.....:.|.:.:.  ::..||.|..:|.:
  Rat   137 SLETSAGREAVLSNQRAGYG---DNKIC-EGSEDKERPDQTNPSANWLH--ARSSRKKRCPYTKY 195

  Fly   310 QLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKR 356
            |...|||.|....||:...|.|:|..|:||:.|||.|:||||.|.|:
  Rat   196 QTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKK 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	26/55 (47%)
Hoxb9	NP_001093967.1	Hox9_act	1..172	CDD:461369	36/168 (21%)
		Homeodomain	186..242	CDD:459649	26/55 (47%)