Protein Alignment B-H1 and Gbx1

DIOPT Version :10

• Sequence 1: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001258382.1
• Gene: Gbx1 / 246149
• RGDID: 621864
• Length: 425
• Species: Rattus norvegicus
• Alignment Length: 362
• Identity: 95/362 - (26%)
• Similarity: 127/362 - (35%)
• Gaps: 137/362 - (37%)

  Fly   112 SSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQP----------HP---PTHPHTHPH 163
            ::||.:|..|..:....|......::.|          |.|          :|   |..|...|.
  Rat    64 AAGGGAPGGSGGSGGGPGTAFSIDSLIG----------PPPPRSGHLLYTGYPMFMPYRPLVLPQ 118

  Fly   164 ALMH---PHGKLGHFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAA----------- 214
            ||..   |.|    .||.|     .:|.:|..:...:.|....|.....|...|
  Rat   119 ALAPAPLPAG----LPPLA-----PLASFAGRLSNTFCAGLGQAVPSMVALTTALPSFAEPPDAY 174

  Fly   215 ------AAAAAAAAAGVAA-----PP---VDGGVD------------------------------ 235
                  |||||||||...:     ||   .||.:|
  Rat   175 YGPPELAAAAAAAAASTVSRSNPEPPARRTDGALDADELLPAREKVTEPPPPPPPPPPHFSETFP 239

  Fly   236 -----GGV------GLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKD----------- 278
                 |.|      .|.||||.....     |..|:...|:.:|..:.|:.|..
  Rat   240 SLPAEGKVYSSDEEKLEPPAGEPAGS-----EPEEEGSGGDSEDSFLDSSAGGPGALLGPKPKLK 299

  Fly   279 -------DDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKL 336
                   ::|..|.:|.|:.    ..|.|:.|||||..||..|||.|..:||||:.||.::||.|
  Rat   300 GSLGTGAEEGTPVATGVTTP----GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHAL 360

  Fly   337 DLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAA 373
            .||:.|||.|:||||.||||         .:|||.::
  Rat   361 KLSEVQVKIWFQNRRAKWKR---------IKAGNVSS 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	33/55 (60%)
Gbx1	NP_001258382.1	Homeodomain	324..380	CDD:459649	33/55 (60%)