DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and gbx2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_694496.1 Gene:gbx2 / 245948 ZFINID:ZDB-GENE-020509-2 Length:342 Species:Danio rerio


Alignment Length:285 Identity:86/285 - (30%)
Similarity:112/285 - (39%) Gaps:91/285 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 VLPSALHHPQPHPPTHPH-----THPHALMHPHGKLGHFPPT-----AGGNGLNVAQYA------ 190
            |||..   |.|.|||.|.     ||||   ||   :...|.:     |.|..|.....|      
Zfish    54 VLPPP---PPPPPPTLPQSALPTTHPH---HP---IPGLPSSFCSSLAQGMALTSTLMATLPGGF 109

  Fly   191 --AAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGV--------------DGGVG 239
              :..|||..||       ....:.:..|....:..:.....||..              ...|.
Zfish   110 SSSPSQQHQDAA-------RKLGSQSIHAMFDKSQDIRLDGEDGKTFATKDSTSIPSFHDSQSVH 167

  Fly   240 LAPPAGGDLDDS--SDYHEENE------DCDSGNMDD---HSVC------SNGGKDDD------- 280
            .:...|...|||  .|.|.::|      |.|..:.|:   :::|      .:||.||.       
Zfish   168 TSTVRGHSKDDSKEDDCHRKDESFSMDSDLDYSSDDNGPGNAMCQKEDGDGSGGLDDGVHGGNGA 232

  Fly   281 GNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKT 345
            ||:..:|          |.|:.|||||..||..|||.|..:||||:.||.::||.|.||:.|||.
Zfish   233 GNTTSTG----------KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 287

  Fly   346 WYQNRRTKWKRQTAVGLELLAEAGN 370
            |:||||.||||         .:|||
Zfish   288 WFQNRRAKWKR---------VKAGN 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 33/55 (60%)
gbx2NP_694496.1 Homeodomain 242..298 CDD:459649 33/55 (60%)

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