DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Vax1

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_033527.1 Gene:Vax1 / 22326 MGIID:1277163 Length:338 Species:Mus musculus


Alignment Length:329 Identity:93/329 - (28%)
Similarity:119/329 - (36%) Gaps:117/329 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 SSDYHEENEDCD--SGNM------DDHSVCSNGGKDDDGNSVKSGSTSD---------------- 291
            |.:.|:|:.:..  .|::      :.....|..|..:|.|..||.|::|                
Mouse    22 SKNAHKESREIKGAEGSLPAAFLKEPQGAFSGSGASEDCNKSKSNSSADPDYCRRILVRDAKGSI 86

  Fly   292 -----MSGLS-KKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNR 350
                 ..||. .:.::.||:||..||..||..|:|.:|:..:||.|||.:|:||:.|||.|:|||
Mouse    87 REIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNR 151

  Fly   351 RTKWKRQTAVGLEL---------------LAEAGNF----------------AAFQRLYGGS-PY 383
            |||.|:......||               |.|.|..                |....|.|.| |.
Mouse   152 RTKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALGSALRGPSLPA 216

  Fly   384 LGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSV-GVGVGVGVGPAPFS 447
            |||   .||||:|             ..||||||...|.|    ||..|. ...||...||.|  
Mouse   217 LGA---GAAAGSA-------------AAAAAAAAATAPGP----AGAASQHQPAVGGAPGPGP-- 259

  Fly   448 HLSASSSLSSLSSYYQSAAAAASAANPGGPHPVAPPPSVGGGSPPSGLVKPIPAHSASASPPPRP 512
                                    |.|||.|..||..|.|        :..:|..|...|...|.
Mouse   260 ------------------------AGPGGLHAGAPTASHG--------LFSLPVPSLLGSVASRL 292

  Fly   513 PSTP 516
            .|.|
Mouse   293 SSAP 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 29/55 (53%)
Vax1NP_033527.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 11/46 (24%)
Homeodomain 101..157 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..269 14/59 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..338
Blue background indicates that the domain is not in the aligned region.

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