DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Nkx2-5

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus


Alignment Length:370 Identity:94/370 - (25%)
Similarity:133/370 - (35%) Gaps:118/370 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 QQHYAAAAAAAAARNNAAAAAAAA--AA----------AAAAGVA----------APP-VDGGVD 235
            ||..:.|:...:||..|..|.|:.  ||          |||:|:|          :|| ......
Mouse    22 QQQRSLASGDLSARLEATLAPASCMLAAFKPEAYSGPEAAASGLAELRAEMGPAPSPPKCSPAFP 86

  Fly   236 GGVGLAPPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQR 300
            ......|.|.||.|.:.|          ...|...:|:.....:...:...|:....   ::::|
Mouse    87 AAPTFYPGAYGDPDPAKD----------PRADKKELCALQKAVELDKAETDGAERPR---ARRRR 138

  Fly   301 KARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTA-VGLEL 364
            |.|..|:..|:..||:.|::|:|||..||.:||..|.|:..|||.|:||||.|.|||.. ..|||
Mouse   139 KPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLEL 203

  Fly   365 LA----EAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYN 425
            |.    .|...|....:..|.|.||                                  .|..| 
Mouse   204 LGPPPPPARRIAVPVLVRDGKPCLG----------------------------------DPAAY- 233

  Fly   426 LYAGVPSVGVGV---GVGVGPAPFSHLSASSSLSSLSSYYQSAAAAASAANPG---GPHPVAPPP 484
                .|:.|||:   |....|.|              ||      ..:|.:||   ..:|.|||.
Mouse   234 ----APAYGVGLNAYGYNAYPYP--------------SY------GGAACSPGYSCAAYPAAPPA 274

  Fly   485 SVGGGSPPSGLVKPIPAHSASASPPPRPPSTPSPTLNPGSPPGRS 529
            :           :| ||.||:::.........:...:||.|.|.|
Mouse   275 A-----------QP-PAASANSNFVNFGVGDLNTVQSPGMPQGNS 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 27/55 (49%)
Nkx2-5NP_032726.1 Homeodomain 144..194 CDD:459649 24/49 (49%)

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