DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Nkx2-2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_035049.1 Gene:Nkx2-2 / 18088 MGIID:97347 Length:273 Species:Mus musculus


Alignment Length:243 Identity:71/243 - (29%)
Similarity:90/243 - (37%) Gaps:74/243 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 APPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTA 305
            |||.    |.||...|.:.|    ...|:...:.||..|.|                |:||.|..
Mouse    94 APPQ----DSSSKSPEPSAD----ESPDNDKETQGGGGDAG----------------KKRKRRVL 134

  Fly   306 FTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTA-VGLELLAEAG 369
            |:..|...||:.|.:|:|||..||:.||..:.|:..|||.|:||.|.|.||..| .|:|:.... 
Mouse   135 FSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTPLP- 198

  Fly   370 NFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVPSVG 434
                       ||...|.|.....|....|..        .|..|||..|        ||:    
Mouse   199 -----------SPRRVAVPVLVRDGKPCHALK--------AQDLAAATFQ--------AGI---- 232

  Fly   435 VGVGVGVGPAPFSHLSASSSLSSLSSYYQSAAAAASAANPGGP--HPV 480
                      |||..||.|     ..:.|..|..:||:.|..|  ||:
Mouse   233 ----------PFSAYSAQS-----LQHMQYNAQYSSASTPQYPTAHPL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 25/55 (45%)
Nkx2-2NP_035049.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..131 15/60 (25%)
Homeodomain 129..185 CDD:459649 25/55 (45%)
Blue background indicates that the domain is not in the aligned region.

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