DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Msx3

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_034966.1 Gene:Msx3 / 17703 MGIID:106587 Length:204 Species:Mus musculus


Alignment Length:109 Identity:45/109 - (41%)
Similarity:58/109 - (53%) Gaps:9/109 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVG 361
            |..||.||.||..||..||:.|.:::|||:.||.|.:..|.|::.|||.|:||||.|.||.....
Mouse    85 KTNRKPRTPFTTAQLLALERKFHQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAE 149

  Fly   362 LELLAEAGN---FAAFQRLYGGSPY-LGAWPYAAAAGAAHGATP 401
            ||.|..|..   .|||     ..|: ||...:::||.....|.|
Mouse   150 LEKLKLAAKPLLPAAF-----ALPFPLGTQLHSSAATFGGNAVP 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
Msx3NP_034966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..89 1/3 (33%)
Homeodomain 88..144 CDD:459649 28/55 (51%)

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