DRSC/TRiP Functional Genomics Resources

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Protein Alignment B-H1 and Msx2

DIOPT Version :10

Sequence 1:NP_523387.1 Gene:B-H1 / 32724 FlyBaseID:FBgn0011758 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus


Alignment Length:264 Identity:76/264 - (28%)
Similarity:97/264 - (36%) Gaps:77/264 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 AGVAAP-PVDGGVDGGVGLAPPAGGDLDDS-----SDYHEENE------DCDS------------ 263
            |.:|.| |..||.:|...........|..|     ||.....|      ||.|            
Mouse    19 AVLAGPGPGPGGAEGSAEERRVKVSSLPFSVEALMSDKKPPKESPAVPPDCASAGAVLRPLLLPG 83

  Fly   264 -GNMDDHSVCSNGG---KDDDGNSVKSGSTSD-----------------MSGLS------KKQRK 301
             |..|.||    .|   |..:..||||.::.|                 ||..:      |..||
Mouse    84 HGVRDAHS----PGPLVKPFETASVKSENSEDGAPWIQEPGRYSPPPRHMSPTTCTLRKHKTNRK 144

  Fly   302 ARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLA 366
            .||.||..||..||:.|.:::|||:.||.|.:..|:|::.|||.|:||||.|.||.....||.| 
Mouse   145 PRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKL- 208

  Fly   367 EAGNFAAFQRLYGG--------SPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLP 423
               ..||...|..|        ||...|..|.|:........|...:.:|          ..|:.
Mouse   209 ---KMAAKPMLPSGFSLPFPINSPLQAASIYGASYPFHRPVLPIPPVGLY----------ATPVG 260

  Fly   424 YNLY 427
            |.:|
Mouse   261 YGMY 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B-H1NP_523387.1 Homeodomain 300..356 CDD:459649 28/55 (51%)
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132 6/27 (22%)
Homeodomain 143..199 CDD:459649 28/55 (51%)

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